| MirGeneDB ID | Pfl-Mir-4830-P7 |
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| Family name |
MIR-4830 (all species) |
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| Seed |
CUCUUGA |
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| Species |
Ptychodera (Ptychodera flava) |
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| MiRBase ID |
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| Paralogues |
Pfl-Mir-4830-P5
Pfl-Mir-4830-P6
Pfl-Mir-4830-P8
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| Orthologues |
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| Node of Origin (locus) |
P. flava
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| Node of Origin (family) |
Enteropneusta
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Genome context
(Pfl) |
LD353158.1: 289927-289988 [-]
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Precursor
(pre-Mir +30nt flank) |
ACAGGUAGAAAACCCCUAGGCCGGCUGGAGUCUCUUGAGAGCCAUAUGGAGGAUGUUUUCUUAACAUCUCCUCCCUAUGCUUUCAUGAGUCUUCAGUAGGUCACAUCUUCAACUUGGUUUUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
ACAGGUAGAAAACCCCUA--| G U U C U UGUUUUC
GGCC GCUGGAG CUC UGAGAGC AUA GGAGGA \
CUGG UGACUUC GAG ACUUUCG UAU CCUCCU U
UUUUUGGUUCAACUUCUACA^ A U U - C CUACAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Mature sequence |
Pfl-Mir-4830-P7_5p |
| mirBase accession | None |
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| Sequence |
0- UCUCUUGAGAGCCAUAUGGAGGA -23
Get sequence
|
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| Star sequence |
Pfl-Mir-4830-P7_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
40- CUCCCUAUGCUUUCAUGAGUCU -62
Get sequence
|
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