| MirGeneDB ID | Pfl-Mir-4830-P6 |
| Family name |
MIR-4830 (all species) |
| Seed |
CUCUUGA |
| Species |
Ptychodera (Ptychodera flava) |
| MiRBase ID |
|
| Paralogues |
Pfl-Mir-4830-P5
Pfl-Mir-4830-P7
Pfl-Mir-4830-P8
|
| Orthologues |
|
| Node of Origin (locus) |
P. flava
|
| Node of Origin (family) |
Enteropneusta
|
Genome context (Pfl) |
LD353158.1: 294064-294125 [-]
|
Precursor (pre-Mir +30nt flank) |
UUUCCAGAAAACAUCAUAGAUAUGGUCUGUUCUCUUGAGAGCCAUAUGGAGGGAGGUAUUUCUGACACCCCUACAUAUGCUCCCAGGACAGCAGAAAAUGUCAAAAAGACCAACGGGAAAAG
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
UUUCCAGAAAACAUCAUA--| GG C A C G AGGUAUU
GAUAU UCUGUU UCUUG GAGC AUAUG AGGG \
CUGUA AGACGA AGGAC CUCG UAUAC UCCC U
GAAAAGGGCAACCAGAAAAA^ AA C C - A CACAGUC
120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | No |
Tissue expression
|
|
| Mature sequence |
Pfl-Mir-4830-P6_5p |
| mirBase accession | None |
| Sequence |
0- UCUCUUGAGAGCCAUAUGGAGGG -23
Get sequence
|
| Star sequence |
Pfl-Mir-4830-P6_3p* |
| mirBase accession | None |
| Sequence |
40- CUACAUAUGCUCCCAGGACAGC -62
Get sequence
|