| MirGeneDB ID | Ovu-Novel-24-v3 |
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| Family name |
COL-NOVEL-24 (all species) |
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| Seed |
AUUUAGU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Novel-24-v1
Ovu-Novel-24-v2
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| Orthologues |
Esc-Novel-24-v3
Obi-Novel-24-v3
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01029285.1: 1863-1924 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAAGAAGAUUAGAGUACAAUUCCGAUCGUUAGCUGGUUAUGUGAACUAAGAUUCAUUUCCUUAUCAAAUAUUUAGUGCACAUAACUGGCUGAUGAAUAGAAUUUGUUAUCGUCUCGGAAAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAAGAAGAUUAGAGUAC-- CGA UG A -| CAUUUC
AAUUC UCGUUAGC GUUAUGUG ACUAAG AUU \
UUAAG AGUAGUCG CAAUACAC UGAUUU UAA C
CUAAAGGCUCUGCUAUUGU AUA GU G A^ ACUAUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-24-v3_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCUGGUUAUGUGAACUAAGAUUC -24
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-24-v3_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UAUUUAGUGCACAUAACUGGCUGA -62
Get sequence
|
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