| MirGeneDB ID | Ovu-Novel-24-v1 |
|---|
| Family name |
COL-NOVEL-24 (all species) |
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| Seed |
UUAGUGC |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Novel-24-v2
Ovu-Novel-24-v3
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| Orthologues |
Esc-Novel-24-v1
Obi-Novel-24-v1
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01029285.1: 1863-1924 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAAGAAGAUUAGAGUACAAUUCCGAUCGUUAGCUGGUUAUGUGAACUAAGAUUCAUUUCCUUAUCAAAUAUUUAGUGCACAUAACUGGCUGAUGAAUAGAAUUUGUUAUCGUCUCGGAAAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAAGAAGAUUAGAGUAC--| CGA UG A AUUCAUUUC
AAUUC UCGUUAGC GUUAUGUG ACUAAG C
UUAAG AGUAGUCG CAAUACAC UGAUUU U
CUAAAGGCUCUGCUAUUGU^ AUA GU G AUAAACUAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-24-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCUGGUUAUGUGAACUAAGAU -22
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-24-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UUUAGUGCACAUAACUGGCUGA -62
Get sequence
|
|---|
