| MirGeneDB ID | Ovu-Novel-20-P2 |
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| Family name |
COL-NOVEL-20 (all species) |
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| Seed |
UCGGGAG |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Novel-20-P1
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| Orthologues |
Esc-Novel-20
Obi-Novel-20-P2
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01008960.1: 7572-7631 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACAUAGGACAAAGUUACUAGCAUGCACGACCAUCUGACUUGCCUCCUGCGGAACACAAUCUGCAUAUCCUCGGGAGACAAGUGAGAUGUCGUGCAUUAGCUGAUGAGACUACAGUCCUGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACAUAGGACAAAGUUAC- --| C G C C ACACAA
UAGC AUGCACGAC AUCU ACUUG CUCCUG GGA U
GUCG UACGUGCUG UAGA UGAAC GAGGGC CCU C
AGUCCUGACAUCAGAGUA AU^ - G A U AUACGU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Novel-20-P2_5p* |
| mirBase accession | None |
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| Sequence |
0- CAUCUGACUUGCCUCCUGCGGA -22
Get sequence
|
|---|
| Mature sequence |
Ovu-Novel-20-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
38- CUCGGGAGACAAGUGAGAUGUC -60
Get sequence
|
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