| MirGeneDB ID | Obi-Novel-20-P2 |
|---|
| Family name |
COL-NOVEL-20 (all species) |
|---|
| Seed |
UCGGGAG |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Obi-Novel-20-P1
|
|---|
| Orthologues |
Esc-Novel-20
Ovu-Novel-20-P2
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ416676: 201531-201590 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACAUAGGACAAUGUUACUAGCAUGCACGACCAUCUGACUUGUCUCCUGCUGAGCACAAUCUGCAUAUCCUCGGGAGACAAGUGAGAUGUCGUGCAUUAGCUGAUGAGACUACAGUCCUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACAUAGGACAAUGUUAC- --| C G CU GCACAA
UAGC AUGCACGAC AUCU ACUUGUCUCCUG GA U
GUCG UACGUGCUG UAGA UGAACAGAGGGC CU C
AGUCCUGACAUCAGAGUA AU^ - G UC AUACGU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-20-P2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAUCUGACUUGUCUCCUGCUGA -22
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-20-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
38- CUCGGGAGACAAGUGAGAUGUC -60
Get sequence
|
|---|
