MirGeneDB 2.1
MirGeneDB ID

Loc-Mir-27-P4

Family name MIR-27 (all species)
Seed UCACAGU
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-27-P1  Loc-Mir-27-P2  Loc-Mir-27-P3 
Orthologues Cmi-Mir-27-P4  Dre-Mir-27-P4a  Gmo-Mir-27-P4a  Gmo-Mir-27-P4b  Lch-Mir-27-P4  Mal-Mir-27-P4a  Mal-Mir-27-P4b  Sto-Mir-27-P4  Tni-Mir-27-P4a  Tni-Mir-27-P4b  Xla-Mir-27-P4c  Xla-Mir-27-P4d  Xtr-Mir-27-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG19: 5780510-5780573 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCCUGUAGCCCAGUCCCUUUCUGAAGGCACAGAGCUUAGCUAAUUGGCGAGCAUUGUUCCUAUCAAUAUAUUGUUCACAGUGGCUAAGUUCAGUGCCCGAAGUGAAACAGUGGAUGGGAUGUGC
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Structure
        10        20          30        40        50        60  
UCCUGUAGCCCAGUCCCUUU--| GAA     A           A   GC     UUGUUCCU 
                      CU   GGCAC GAGCUUAGCUA UUG  GAGCA        A
                      GA   CCGUG CUUGAAUCGGU GAC  CUUGU        U
CGUGUAGGGUAGGUGACAAAGU^ AGC     A           -   A-     UAUAUAAC 
  120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-27-P4_5p*
mirBase accessionNone
Sequence 
0- AGAGCUUAGCUAAUUGGCGAGCA -23
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Mature sequence

Loc-Mir-27-P4_3p
mirBase accessionNone
Sequence 
43- UUCACAGUGGCUAAGUUCAGU -64
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