MirGeneDB 2.1
MirGeneDB ID

Isc-Mir-305

Family name MIR-305 (all species)
Seed UUGUACU
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-305
Paralogues
Orthologues Aae-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P1  Cbr-Mir-305-P2  Cbr-Mir-305-P3  Cel-Mir-305-P1  Cel-Mir-305-P2  Csc-Mir-305  Dan-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Hme-Mir-305  Lpo-Mir-305-P4  Lpo-Mir-305-P5  Lpo-Mir-305-P6  Lpo-Mir-305-P7  Lpo-Mir-305-P8  Tca-Mir-305 
Node of Origin (locus) Ecdysozoa
Node of Origin (family) Ecdysozoa
Genome context
(IscaWI)		 DS945001: 228273-228337 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-305)		 Mir-305 DS945001: 228273-228337 [-] Ensembl
Mir-275 DS945001: 243256-243318 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGUUUUCGUGCGGCCCAGUCACUAGUUAAUUGUACUUCAUCAGGUGCUCUGGAGUUCGGUUCGCACAACCAGGCAUCUUUUGGAGUGCAAAUGAUAAGUGGCACGAAUACGUCCAGACCAUCG
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Structure
        10          20        30        40        50        60  
GUGGUUUUCGUGCGGCCCA--|     A    A          UC      U    AGUUCGG 
                     GUCACU GUUA UUGUACUUCA  AGGUGC CUGG       U
                     CGGUGA UAGU AACGUGAGGU  UCUACG GACC       U
GCUACCAGACCUGCAUAAGCA^     A    A          UU      -    AACACGC 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Al Mi Mi Mi Sa Sa Sa Sa To
Mature sequence

Isc-Mir-305_5p
mirBase accessionMIMAT0018920
Sequence 
0- AUUGUACUUCAUCAGGUGCUCUGG -24
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Star sequence

Isc-Mir-305_3p*
mirBase accessionNone
Sequence 
42- AGGCAUCUUUUGGAGUGCAAAUG -65
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