Mir-493

MirGeneDB ID

Hsa-Mir-493

Family name

MIR-493 (all species)

Seed

UGUACAU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-493

Paralogues

Orthologues

Bta-Mir-493 Cfa-Mir-493 Cpo-Mir-493 Dno-Mir-493 Ete-Mir-493 Mml-Mir-493 Mmu-Mir-493 Ocu-Mir-493 Rno-Mir-493

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chr14: 100869075-100869136 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-493)

Mir-770 chr14: 100852409-100852470 [+] UCSC Ensembl
Mir-493 chr14: 100869075-100869136 [+] UCSC Ensembl
Mir-337-v1 chr14: 100874515-100874574 [+] UCSC Ensembl
Mir-337-v2 chr14: 100874515-100874574 [+] UCSC Ensembl
Mir-431 chr14: 100881026-100881089 [+] UCSC Ensembl
Mir-433 chr14: 100881897-100881970 [+] UCSC Ensembl
Mir-127 chr14: 100883001-100883056 [+] UCSC Ensembl
Mir-432 chr14: 100884496-100884564 [+] UCSC Ensembl
Mir-136-v2 chr14: 100884716-100884771 [+] UCSC Ensembl
Mir-136-v1 chr14: 100884716-100884771 [+] UCSC Ensembl
Mir-370 chr14: 100911151-100911207 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GCUUCGGGGCUCAUUCUGGCCUCCAGGGCUUUGUACAUGGUAGGCUUUCAUUCAUUCGUUUGCACAUUCGGUGAAGGUCUACUGUGUGCCAGGCCCUGUGCCAGGCAUCGUGUAGAUGGACG

Get precursor sequence

Structure

        10           20        30        40        50        60 
GCUUCGGGGCUCAUUCU---|  CUC        U                    CAUUCGUU 
                    GGC   CAGGGCUU GUACAUGGUAGGCUUUCAUU        \
                    CCG   GUCCCGGA CGUGUGUCAUCUGGAAGUGG        U
GCAGGUAGAUGUGCUACGGA^  U--        C                    CUUACACG 
120       110       100          90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Yes

Motifs

UG at 5p(-14)

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Mature sequence

Hsa-Mir-493_5p

mirBase accession

MIMAT0002813

Sequence

0- UUGUACAUGGUAGGCUUUCAUU -22

Get sequence

Proposed targets

microrna.org: MIMAT0002813
TargetScanVert: hsa-miR-493-5p
TargetMiner: hsa-miR-493-5p
miRDB: MIMAT0002813

Star sequence

Hsa-Mir-493_3p*

mirBase accession

MIMAT0003161

Sequence

41- UGAAGGUCUACUGUGUGCCAG -62

Get sequence

Proposed targets

microrna.org: MIMAT0003161
TargetScanVert: hsa-miR-493-3p
TargetMiner: hsa-miR-493-3p
miRDB: MIMAT0003161