MirGeneDB 2.1
MirGeneDB ID

Esc-Mir-278

Family name MIR-278 (all species)
Seed CGGUGGG
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-278  Bfl-Mir-278  Bge-Mir-278  Bla-Mir-278  Cgi-Mir-278  Csc-Mir-278  Cte-Mir-278  Dan-Mir-278  Dma-Mir-278  Dme-Mir-278  Dmo-Mir-278  Dpu-Mir-278  Dsi-Mir-278  Dya-Mir-278  Efe-Mir-278-P1-v1  Efe-Mir-278-P1-v2  Efe-Mir-278-P2  Hme-Mir-278  Isc-Mir-278  Lan-Mir-278  Lgi-Mir-278  Lpo-Mir-278-P3  Lpo-Mir-278-P4  Lpo-Mir-278-P5  Npo-Mir-278  Obi-Mir-278  Ovu-Mir-278  Pfl-Mir-278  Pmi-Mir-278  Sko-Mir-278  Sme-Mir-278  Spu-Mir-278  Xbo-Mir-278 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_004765925.1_miRNA_LOCI)		 Esc-Mir-278_pre_SRIE01056510.1:3419959-3420099: 41-101 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUUUCACCCAUAUUUCCGUUCGUUGUUACCGAGGGAAAGGCUCGUCAUGAUCUUGUCAAACUGAUGAUCGGUGGGACUUUCGUUCGUUAAUGGCGAAUGGACAUGCAGCAAACGAAACU
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Structure
        10          20        30        40        50        60 
UCAUUUCACCCAUAUUU--|       UG   C    G     G   GU AU    UUGUCA 
                   CCGUUCGU  UUA CGAG GAAAG CUC  C  GAUC      \
                   GGUAAGCG  AAU GCUU CUUUC GGG  G  CUAG      A
UCAAAGCAAACGACGUACA^       GU   U    G     A   UG --    UAGUCA 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ce Li
Star sequence

Esc-Mir-278_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCGAGGGAAAGGCUCGUCAUGAUC -24
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Mature sequence

Esc-Mir-278_3p
mirBase accessionNone
Sequence 
39- UCGGUGGGACUUUCGUUCGUUA -61
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