MirGeneDB 2.1
MirGeneDB ID

Csc-Mir-278

Family name MIR-278 (all species)
Seed CGGUGGG
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues
Orthologues Aae-Mir-278  Bfl-Mir-278  Bge-Mir-278  Bla-Mir-278  Cgi-Mir-278  Cte-Mir-278  Dan-Mir-278  Dma-Mir-278  Dme-Mir-278  Dmo-Mir-278  Dpu-Mir-278  Dsi-Mir-278  Dya-Mir-278  Efe-Mir-278-P1-v1  Efe-Mir-278-P1-v2  Efe-Mir-278-P2  Esc-Mir-278  Hme-Mir-278  Isc-Mir-278  Lan-Mir-278  Lgi-Mir-278  Lpo-Mir-278-P3  Lpo-Mir-278-P4  Lpo-Mir-278-P5  Npo-Mir-278  Obi-Mir-278  Ovu-Mir-278  Pfl-Mir-278  Pmi-Mir-278  Sko-Mir-278  Sme-Mir-278  Spu-Mir-278  Xbo-Mir-278 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)		 NW_019385430.1: 86408-86470 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGGAAAUUUCUUAUUGCAGCGCGUUAUAAACGGACGAGGAUUUCACGACGACCGUACGUUAUAUCGGGUCGGUGGGAUUUUCGUCCGAAUGAAACGCGUCCUGUGACGUCAUUGAAGUUAU
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Structure
        10        20          30        40        50        60  
CAUGGAAAUUUCUUAUUGCA--|      A  AA           UU   GA     GUACGU 
                      GCGCGUU UA  CGGACGAGGAU  CAC  CGACC      \
                      UGCGCAA GU  GCCUGCUUUUA  GUG  GCUGG      U
UAUUGAAGUUACUGCAGUGUCC^      A  AA           GG   --     GCUAUA 
 120       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-278_5p*
mirBase accessionNone
Sequence 
0- AACGGACGAGGAUUUCACGACGACC -25
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Mature sequence

Csc-Mir-278_3p
mirBase accessionNone
Sequence 
40- UCGGUGGGAUUUUCGUCCGAAUG -63
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