| MirGeneDB ID | Dya-Mir-964-v1 |
|---|
| Family name |
MIR-964 (all species) |
|---|
| Seed |
UAGAAUA |
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| Species |
Fruit fly (Drosophila yakuba) |
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| MiRBase ID |
|
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| Paralogues |
Dya-Mir-964-v2
|
|---|
| Orthologues |
Dan-Mir-964
Dme-Mir-964-v1
Dmo-Mir-964
Dsi-Mir-964-v1
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
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Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 13551083-13551143 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCAAUCAAUGAAAUCUUGGUCCCACUUGUCUUAGAAUAGGGGAGCUUAACUUAUGUAUAUCAUGUAUAAGUUAAGAACCUUUAUUCUAAGACAAUUCGACUACAAAAUCAACUGAAAAACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCAAUCAAUGAAAUCUU---| CCAC AG AUGUAUA
GGUC UUGUCUUAGAAUAGGGG CUUAACUU \
UCAG AACAGAAUCUUAUUUCC GAAUUGAA U
UCAAAAAGUCAACUAAAACA^ CUU- AA UAUGUAC
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dya-Mir-964-v1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUAGAAUAGGGGAGCUUAACUU -22
Get sequence
|
|---|
| Star sequence |
Dya-Mir-964-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- GUUAAGAACCUUUAUUCUAAGA -61
Get sequence
|
|---|
