| MirGeneDB ID | Dmo-Mir-964 |
|---|
| Family name |
MIR-964 (all species) |
|---|
| Seed |
UAGAAUA |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dan-Mir-964
Dme-Mir-964-v1
Dme-Mir-964-v2
Dsi-Mir-964-v1
Dsi-Mir-964-v2
Dya-Mir-964-v1
Dya-Mir-964-v2
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
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Genome context
(Dmoj_caf1) |
scaffold_6500: 14019536-14019594 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUGUGAUGAAAUCAUUGAGUUCAACUUAUCUUAGAAUAGGGGAGCUUAACUUAAUCUGAACACUCAAGCUAAGAGCCUCGAUUCUUCGAUAAUGCGACUAACAGCAACUAAUUUAACUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUGUGAUGAAAUCAUUG--- -| AC UU A AG A AAUCUG
AGUU CA UUAUC AGAAU GGGG CUUA CUU \
UCAG GU AAUAG UCUUA CUCC GAAU GAA A
GUCAAUUUAAUCAACGACAA C^ -- CU G GA C CUCACA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dmo-Mir-964_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUAGAAUAGGGGAGCUUAACUU -22
Get sequence
|
|---|
| Star sequence |
Dmo-Mir-964_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- GCUAAGAGCCUCGAUUCUUCGA -59
Get sequence
|
|---|
