| MirGeneDB ID | Dan-Mir-964 |
|---|
| Family name |
MIR-964 (all species) |
|---|
| Seed |
UAGAAUA |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dme-Mir-964-v1
Dme-Mir-964-v2
Dmo-Mir-964
Dsi-Mir-964-v1
Dsi-Mir-964-v2
Dya-Mir-964-v1
Dya-Mir-964-v2
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
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Genome context
(Dana_caf1) |
scaffold_12916: 11085596-11085658 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GAUGAGCAUCGAAUCAAAGUCAAACUUGUUUUAGAAUAGGGGAGCUUAACUUAUUGGAGAGUUGAUAUUAAGUUAAGAUCCCUAAUUCUAAGAUAAUGUGACCAUUAAUGCAACGUUGUUUUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAUGAGCAUCGAAUCAAA---| AAC A G AUUGGAGA
GUCA UUGUUUUAGAAU GGGGA CUUAACUU \
CAGU AAUAGAAUCUUA UCCCU GAAUUGAA G
AUUUUGUUGCAACGUAAUUAC^ GU- A A UUAUAGUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dan-Mir-964_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUAGAAUAGGGGAGCUUAACUU -22
Get sequence
|
|---|
| Star sequence |
Dan-Mir-964_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
41- GUUAAGAUCCCUAAUUCUAAGA -63
Get sequence
|
|---|
