| MirGeneDB ID | Dya-Mir-963 |
|---|
| Family name |
MIR-963 (all species) |
|---|
| Seed |
CAUCUGU |
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| Species |
Fruit fly (Drosophila yakuba) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dan-Mir-963
Dme-Mir-963-v1
Dme-Mir-963-v2
Dmo-Mir-963-v1
Dmo-Mir-963-v2
Dsi-Mir-963
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
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Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 13551212-13551277 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CACUACUGCAUUGUUCUUGGUCUAAUCUAAAACAAGGUACAUAUCAGGUUGUUUCCUAUAUUGGAUGAUCGAAACAUCUGUAUAUACCUUUGUUCCGAAUGGACGAAAGAGCAUCUUCAAGUUAUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CACUACUGCAUUGUUCUUG---| A UAA - C U U CCUAUAUU
GUCUA UC AACAA GGUA AUA CAGGU GUUU \
CAGGU AG UUGUU CCAU UAU GUCUA CAAA G
AUAUUGAACUUCUACGAGAAAG^ A CC- U A - - GCUAGUAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dya-Mir-963_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AACAAGGUACAUAUCAGGUUGUUU -24
Get sequence
|
|---|
| Mature sequence |
Dya-Mir-963_3p |
| mirBase accession | None |
|---|
| Sequence |
43- ACAUCUGUAUAUACCUUUGUUCC -66
Get sequence
|
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