| MirGeneDB ID | Dan-Mir-963 |
|---|
| Family name |
MIR-963 (all species) |
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| Seed |
CAAGGUA |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dme-Mir-963-v1
Dme-Mir-963-v2
Dmo-Mir-963-v1
Dmo-Mir-963-v2
Dsi-Mir-963
Dya-Mir-963
|
|---|
| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
|
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Genome context
(Dana_caf1) |
scaffold_12916: 11085461-11085523 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGUUAAAAAGUGUUCUUGAUUUAAUCUAAAACAAGGUACAUAUCUGGUUGUUUCCUAUAUUCAAAGUUUGAAACAUCUGUAUCUACCUUUGUUUCGAUUAAACUAAAGAGCUACUAAGAAUAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGUUAAAAAGUGUUCUUGA--| UA - C CU U CUAUAUU
UUUAAUC AAACAA GGUA AUAU GG UGUUUC \
AAAUUAG UUUGUU CCAU UAUG UC ACAAAG C
CAUAAGAAUCAUCGAGAAAUC^ C- U C -- U UUUGAAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dan-Mir-963_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACAAGGUACAUAUCUGGUUGUUUC -24
Get sequence
|
|---|
| Star sequence |
Dan-Mir-963_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- AACAUCUGUAUCUACCUUUGUU -63
Get sequence
|
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