| MirGeneDB ID | Dmo-Mir-963-v2 |
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| Family name |
MIR-963 (all species) |
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| Seed |
ACAAGGU |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
Dmo-Mir-963-v1
|
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| Orthologues |
Dan-Mir-963
Dme-Mir-963-v2
Dsi-Mir-963
Dya-Mir-963
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
|
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Genome context
(Dmoj_caf1) |
scaffold_6500: 14019391-14019455 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGGAGUGCGCACUGAAUCGGUCUAAUCUAAAACAAGGUACAUAUCAGAGUGUUUCCCGUAUUCGAGUUUUGAAACCUCUGUAUAUACCUUUCAUUAGAUUCAACCGAAAGUCCAUAAAUAUUGAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UGGAGUGCGCACUGAAU--| CU AAC C U U CCCGUAUU
CGGU AAUCUAA AAGGUA AUA CAGAG GUUU \
GCCA UUAGAUU UUCCAU UAU GUCUC CAAA C
UAGUUAUAAAUACCUGAAA^ AC ACU A - - GUUUUGAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Dmo-Mir-963-v2_5p |
| mirBase accession | None |
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| Sequence |
0- AACAAGGUACAUAUCAGAGUGUUU -24
Get sequence
|
|---|
| Star sequence |
Dmo-Mir-963-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
43- ACCUCUGUAUAUACCUUUCAUU -65
Get sequence
|
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