| MirGeneDB ID | Dmo-Mir-962 |
|---|
| Family name |
MIR-962 (all species) |
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| Seed |
UAAGGUA |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Dan-Mir-962
Dme-Mir-962
Dsi-Mir-962
Dya-Mir-962
|
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
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Genome context
(Dmoj_caf1) |
scaffold_6500: 14018377-14018449 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUUUUGUCGUACUCGUAGAGCGCUCAAGUUAUAAGGUAGAGAUAUUGUUGUCUUUUUGCAUAUAGCACUCUGUUAUGAAAGACAUCAAUUCACUAGCUUUCAAUUUGUACGCUUAAAUGCAGCAACACACAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GUUUUGUCGUACUCGUA--| CU AU G A U U UUUUGCAUAUAG
GAGCG CAAGUU AAG UAG GA AUUG UGUCU C
UUCGC GUUUAA UUC AUC CU UAAC ACAGA A
UGACACACAACGACGUAAA^ AU CU G A - U AAGUAUUGUCUC
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Dmo-Mir-962_5p |
| mirBase accession | None |
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| Sequence |
0- AUAAGGUAGAGAUAUUGUUGUCU -23
Get sequence
|
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| Star sequence |
Dmo-Mir-962_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
51- ACAUCAAUUCACUAGCUUUCAA -73
Get sequence
|
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