MirGeneDB 2.1
MirGeneDB ID

Dmo-Mir-960

Family name MIR-960 (all species)
Seed AUACAGU
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Dan-Mir-960  Dme-Mir-960  Dsi-Mir-960  Dya-Mir-960 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Dmoj_caf1)		 scaffold_6500: 14018218-14018275 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAGAUUGAAAAUUGACUAAGUCAUGCUUUGAGUAUUCCUUAUUGCAUAGUUUACAUAUAAUUACUAUACAGUCUGGAGCACUUAAAGUUGGGCAUAGACAACCGAACAACUUAGGA
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Structure
        10          20        30        40        50        
UGAAGAUUGAAAAUUGA--|  A   AU         A    UU    C     UUACA 
                   CUA GUC  GCUUUGAGU UUCC  AUUG AUAGU     U
                   GAU CGG  UGAAAUUCA GAGG  UGAC UAUCA     A
AGGAUUCAACAAGCCAACA^  A   GU         C    UC    A     UUAAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Em Fe Ma Ma
Star sequence

Dmo-Mir-960_5p*
mirBase accessionNone
Sequence 
0- UGAGUAUUCCUUAUUGCAUAGU -22
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Mature sequence

Dmo-Mir-960_3p
mirBase accessionNone
Sequence 
36- UAUACAGUCUGGAGCACUUAAA -58
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