Mir-192-P2

MirGeneDB ID

Cpo-Mir-192-P2

Family name

MIR-192 (all species)

Seed

UGACCUA

Species

Guinea pig (Cavia porcellus)

MiRBase ID

cpo-mir-192

Paralogues

Cpo-Mir-192-P1

Orthologues

Ami-Mir-192-P2 Bta-Mir-192-P2 Cfa-Mir-192-P2 Cpi-Mir-192-P2 Dno-Mir-192-P2 Dre-Mir-192-P2b Ete-Mir-192-P2 Gja-Mir-192-P2 Gmo-Mir-192-P2b Hsa-Mir-192-P2 Loc-Mir-192-P2 Mal-Mir-192-P2b Mml-Mir-192-P2 Mmu-Mir-192-P2 Mun-Mir-192-P2 Oan-Mir-192-P2 Ocu-Mir-192-P2 Rno-Mir-192-P2 Sha-Mir-192-P2 Spt-Mir-192-P2 Tni-Mir-192-P2b-v1 Tni-Mir-192-P2b-v2 Xla-Mir-192-P2c Xla-Mir-192-P2d Xtr-Mir-192-P2

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(cavPor3)

scaffold_42: 5717225-5717289 [-] UCSC

Clustered miRNAs
(< 50kb from Mir-192-P2)

Mir-192-P2 scaffold_42: 5717225-5717289 [-] UCSC
Mir-194-P2 scaffold_42: 5717423-5717480 [-] UCSC

Precursor
(pre-Mir +30nt flank)

UGGGCUGCCCAAGACCGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUGCUGUCAGCUCCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCUGCCGCCGCUG

Get precursor sequence

Structure

        10          20        30          40        50        60 
UGGGCUGCCCAAGACCGA--   C   GG   C-        -|     A     AGUGCUGUC 
                    GUG ACA  GCU  UGACCUAU GAAUUG CAGCC         A
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         G
GUCGCCGCCGUCCGUAACUC   U   A-   AC        C^     C     UCUCCCCUC 
   120       110       100         90        80        70