MirGeneDB 2.1
MirGeneDB ID

Loc-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues
Orthologues Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Dre-Mir-192-P2b  Ete-Mir-192-P2  Gja-Mir-192-P2  Gmo-Mir-192-P2b  Hsa-Mir-192-P2  Mal-Mir-192-P2b  Mml-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Ocu-Mir-192-P2  Rno-Mir-192-P2  Sha-Mir-192-P2  Spt-Mir-192-P2  Tni-Mir-192-P2b-v1  Tni-Mir-192-P2b-v2  Xla-Mir-192-P2c  Xla-Mir-192-P2d  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG28: 158411-158472 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACGAGCCCGCAGGGCCAGGGGCGCAGGACGAUGACCUAUGAAUUGACAGCCAGUGUUGUAUGGCGCCUGCCUGUCAGUUCUAUAGGCCACAGGCCUGCGGCCUCACUCCUGGACGCUCGGAC
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Structure
        10         20         30         40        50          
ACGAGCCCGCAGGGCCA-    -      ACGA  A     -|         C  GUGUUGU 
                  GGGG CGCAGG    UG CCUAU GAAUUGACAG CA       \
                  CUCC GCGUCC    AC GGAUA CUUGACUGUC GU       A
CAGGCUCGCAGGUCCUCA    G      GGAC  C     U^         C  CCGCGGU 
120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU Yes
MotifsUGUG in loop
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-192-P2_5p
mirBase accessionNone
Sequence 
0- AUGACCUAUGAAUUGACAGCCA -22
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Star sequence

Loc-Mir-192-P2_3p*
mirBase accessionNone
Sequence 
39- CCUGUCAGUUCUAUAGGCCACAG -62
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