MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-92-P2d

Family name MIR-92 (all species)
Seed AUUGCAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-25
Paralogues Cfa-Mir-92-P1a  Cfa-Mir-92-P1c  Cfa-Mir-92-P1d  Cfa-Mir-92-P2a  Cfa-Mir-92-P2c 
Orthologues Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2d  Cel-Mir-92  Cmi-Mir-92-P2d  Cpo-Mir-92-P2d  Dno-Mir-92-P2d  Dre-Mir-92-P2d  Esc-Mir-92  Ete-Mir-92-P2d  Gmo-Mir-92-P2d  Hsa-Mir-92-P2d  Isc-Mir-92  Lch-Mir-92-P2d  Loc-Mir-92-P2d  Mal-Mir-92-P2d  Mdo-Mir-92-P2d  Mml-Mir-92-P2d  Mmu-Mir-92-P2d  Oan-Mir-92-P2d  Obi-Mir-92  Ocu-Mir-92-P2d  Rno-Mir-92-P2d  Sha-Mir-92-P2d  Sme-Mir-92  Tni-Mir-92-P2d  Xla-Mir-92-P2d3  Xla-Mir-92-P2d4  Xtr-Mir-92-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(canFam3_add)		 chr6: 9498993-9499051 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P2d)		 Mir-17-P1d chr6: 9498558-9498617 [+] UCSC Ensembl
Mir-17-P4d chr6: 9498780-9498841 [+] UCSC Ensembl
Mir-92-P2d chr6: 9498993-9499051 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCUGAACCCCGGGACUGGCCAGCGUUGAGAGGCGGAGACUUGGGCAAUUGCUGGACGCUGCCCGCGCAUUGCACUUGUCUCGGUCUGACAGUGCCGGCCCCGCACUGCAGCUGCUGGG
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Structure
        10          20        30        40          50        
AGCUGAACCCCGGGACU--    A      AG    G     UU  -     -|  UGGAC 
                   GGCC GCGUUG  AGGC GAGAC  GG GCAAU UGC     G
                   CCGG CGUGAC  UCUG CUCUG  UC CGUUA GCG     C
GGGUCGUCGACGUCACGCC    C      AG    G     U-  A     C^  CCCGU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-92-P2d_5p*
mirBase accessionNone
Sequence 
0- AGGCGGAGACUUGGGCAAUUGCU -23
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Mature sequence

Cfa-Mir-92-P2d_3p
mirBase accessionMIMAT0006697
Sequence 
37- CAUUGCACUUGUCUCGGUCUGA -59
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Proposed targets TargetScanVert: cfa-miR-25
miRDB: MIMAT0006697