MirGeneDB 2.1
MirGeneDB ID

Tni-Mir-92-P2d

Family name MIR-92 (all species)
Seed AUUGCAC
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-25
Paralogues Tni-Mir-92-P1a1  Tni-Mir-92-P1a2 
Orthologues Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2d  Cel-Mir-92  Cfa-Mir-92-P2d  Cmi-Mir-92-P2d  Cpo-Mir-92-P2d  Dno-Mir-92-P2d  Dre-Mir-92-P2d  Esc-Mir-92  Ete-Mir-92-P2d  Gmo-Mir-92-P2d  Hsa-Mir-92-P2d  Isc-Mir-92  Lch-Mir-92-P2d  Loc-Mir-92-P2d  Mal-Mir-92-P2d  Mdo-Mir-92-P2d  Mml-Mir-92-P2d  Mmu-Mir-92-P2d  Oan-Mir-92-P2d  Obi-Mir-92  Ocu-Mir-92-P2d  Rno-Mir-92-P2d  Sha-Mir-92-P2d  Sme-Mir-92  Xla-Mir-92-P2d3  Xla-Mir-92-P2d4  Xtr-Mir-92-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 1: 5569539-5569598 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCUUCCUGAGAGAUUGGCUGGUGUUGAGAGGCGGAGACUUGGGCAAUUGCCGGCCAUCACAGAGGGCAUUGCACUUGUCUCGGUCUGACAGUGCCGGCACAGCUCAGCUUUGAAAGUC
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Structure
        10          20        30        40         50          
CUGCUUCCUGAGAGAUUG--|    UG   AG    G     UU  -     U   GGCCAU 
                    GCUGG  UUG  AGGC GAGAC  GG GCAAU GCC      \
                    CGGCC  GAC  UCUG CUCUG  UC CGUUA CGG      C
CUGAAAGUUUCGACUCGACA^    GU   AG    G     U-  A     -   GAGACA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-92-P2d_5p*
mirBase accessionNone
Sequence 
0- AGGCGGAGACUUGGGCAAUUGCC -23
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Mature sequence

Tni-Mir-92-P2d_3p
mirBase accessionMIMAT0002915
Sequence 
38- CAUUGCACUUGUCUCGGUCUGA -60
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