MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-506-P3a

Family name MIR-506 (all species)
Seed CUGUCAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-508a
Paralogues Cfa-Mir-506-P1  Cfa-Mir-506-P2d  Cfa-Mir-506-P2e  Cfa-Mir-506-P3b  Cfa-Mir-506-P7 
Orthologues Bta-Mir-506-P3  Cpo-Mir-506-o3  Dno-Mir-506-P3  Hsa-Mir-506-P3  Mml-Mir-506-P3  Ocu-Mir-506-P3 
Node of Origin (locus) C. familiaris
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 115658398-115658456 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P3a)		 Mir-506-P1 chrX: 115652425-115652482 [-] UCSC Ensembl
Mir-506-P2d chrX: 115652721-115652779 [-] UCSC Ensembl
Mir-506-P3a chrX: 115658398-115658456 [-] UCSC Ensembl
Mir-506-P3b chrX: 115658609-115658666 [-] UCSC Ensembl
Mir-506-P2e chrX: 115665393-115665450 [-] UCSC Ensembl
Mir-506-P7 chrX: 115688019-115688076 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCCACCACCUUCAGCUGAGUGUAGUGCUCUACUUGAGAGGGUGACAUUCAUAGAUACUAGAACAUGACUGUCACCUUUUUUGAGUACAGUAAUGCACAUUAUAUACAAUCUAUAUGGU
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Structure
        10          20        30         40        50        
AGCCACCACCUUCAGCUGA--     G    C    UG -|         U   UAGAUA 
                     GUGUA UGCU UACU  A GAGGGUGACA UCA      C
                     CACGU AUGA AUGA  U UUUCCACUGU AGU      U
UGGUAUAUCUAACAUAUAUUA     A    C    GU U^         C   ACAAGA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-506-P3a_5p*
mirBase accessionMIMAT0034419
Sequence 
0- UACUUGAGAGGGUGACAUUCA -21
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Proposed targets TargetScanVert: cfa-miR-508a
miRDB: MIMAT0034419
Mature sequence

Cfa-Mir-506-P3a_3p
mirBase accessionNone
Sequence 
37- ACUGUCACCUUUUUUGAGUACA -59
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