MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-506-P2d

Family name MIR-506 (all species)
Seed GAUUGGC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-507a
Paralogues Cfa-Mir-506-P1  Cfa-Mir-506-P2e  Cfa-Mir-506-P3a  Cfa-Mir-506-P3b  Cfa-Mir-506-P7 
Orthologues Cpo-Mir-506-o2  Dno-Mir-506-P2  Hsa-Mir-506-P2  Mml-Mir-506-P2  Mmu-Mir-506-P2  Ocu-Mir-506-P2  Rno-Mir-506-P2 
Node of Origin (locus) C. familiaris
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 115652721-115652779 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P2d)		 Mir-506-P1 chrX: 115652425-115652482 [-] UCSC Ensembl
Mir-506-P2d chrX: 115652721-115652779 [-] UCSC Ensembl
Mir-506-P3a chrX: 115658398-115658456 [-] UCSC Ensembl
Mir-506-P3b chrX: 115658609-115658666 [-] UCSC Ensembl
Mir-506-P2e chrX: 115665393-115665450 [-] UCSC Ensembl
Mir-506-P7 chrX: 115688019-115688076 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACCUUUACCUAUGGUGUGUGCAGUGCUCCACUUCAGGAAGUGCCAUCCAUGUAGCUAAAACCUAUGAUUGGCACCUCUUUGAGUGUAGCAAUGUGCAACAGGUACAACAUCAGUGCU
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Structure
        10          20        30        40        50         
CCACCUUUACCUAUGGUG--| UG  G    C     C    A      UC    UAGCU 
                    UG  CA UGCU CACUU AGGA GUGCCA  CAUG     \
                    AC  GU ACGA GUGAG UUCU CACGGU  GUAU     A
UCGUGACUACAACAUGGACA^ GU  A    U     U    C      UA    CCAAA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-506-P2d_5p*
mirBase accessionNone
Sequence 
0- CACUUCAGGAAGUGCCAUCCAUG -23
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Mature sequence

Cfa-Mir-506-P2d_3p
mirBase accessionMIMAT0034432
Sequence 
36- UGAUUGGCACCUCUUUGAGUGUA -59
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Proposed targets TargetScanVert: cfa-miR-507a
miRDB: MIMAT0034432