Mir-362-P5

MirGeneDB ID

Cfa-Mir-362-P5

Family name

MIR-362 (all species)

Seed

AAUCCUU

Species

Dog (Canis familiaris)

MiRBase ID

Paralogues

Cfa-Mir-362-P1 Cfa-Mir-362-P2-v1 Cfa-Mir-362-P2-v2 Cfa-Mir-362-P4

Orthologues

Bta-Mir-362-P5 Cpo-Mir-362-P5 Dno-Mir-362-P5 Hsa-Mir-362-P5 Mml-Mir-362-P5

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(canFam3_add)

chrX: 42781869-42781930 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P5)

Mir-188-P2 chrX: 42774680-42774738 [+] UCSC Ensembl
Mir-188-P1 chrX: 42775072-42775131 [+] UCSC Ensembl
Mir-362-P2-v1 chrX: 42779871-42779932 [+] UCSC Ensembl
Mir-362-P2-v2 chrX: 42779872-42779931 [+] UCSC Ensembl
Mir-362-P1 chrX: 42780369-42780427 [+] UCSC Ensembl
Mir-188-P3 chrX: 42783965-42784023 [+] UCSC Ensembl
Mir-362-P4 chrX: 42785601-42785660 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUGGAAUCUUCUGGUCUGGCUCCCCCUCUCUAAUCCUUGCUACCUGGGUGAGAGUGCUUUCUGAAUGCAAUGCACCUAGGCAAGGAUUCCGAGAGGGGGAGCGCCAGCCAUCUUUGCAUGAG

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Structure

        10          20        30         40        50         60 
CUGGAAUCUUCUGGUCUG--            U-|        UAC       AGA-  GCUUU 
                    GCUCCCCCUCUC  AAUCCUUGC   CUGGGUG    GU     \
                    CGAGGGGGAGAG  UUAGGAACG   GAUCCAC    CG     C
GAGUACGUUUCUACCGACCG            CC^        ---       GUAA  UAAGU 
120       110       100        90        80           70

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Bl	Ce	Co	He	Hy	Ki	Ki	Li	Lu	Ov	Sk	Te	Te

Mature sequence

Cfa-Mir-362-P5_5p

mirBase accession

None

Sequence

0- UAAUCCUUGCUACCUGGGUGAGAGU -25

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Star sequence

Cfa-Mir-362-P5_3p*

mirBase accession

None

Sequence

39- AUGCACCUAGGCAAGGAUUCCGA -62

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