MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-16-2
Paralogues Cfa-Mir-15-P1a  Cfa-Mir-15-P1b  Cfa-Mir-15-P1c  Cfa-Mir-15-P1d  Cfa-Mir-15-P2a  Cfa-Mir-15-P2c  Cfa-Mir-15-P2d 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cin-Mir-15-P2  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(canFam3_add)		 chr34: 26460807-26460871 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2b)		 Mir-15-P1b chr34: 26460663-26460722 [+] UCSC Ensembl
Mir-15-P2b chr34: 26460807-26460871 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUGGAUGACUGACGUACUUGUUCCGCUCUAGCAGCACGUAAAUAUUGGCGUAGUGAAAUAAAAAUUAAACACCAAUAUUAUUGUGCUGCUUUAGCGUGACAGGAAUAUAACAGCUAUUUAUUG
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Structure
        10          20        30        40        50        60  
AUUUGGAUGACUGACGUA--|    UC    CU         UA        C  AGUGAAAU 
                    CUUGU  CGCU  AGCAGCACG  AAUAUUGG GU        \
                    GGACA  GCGA  UCGUCGUGU  UUAUAACC CA        A
GUUAUUUAUCGACAAUAUAA^    GU    UU         UA        A  AAUUAAAA 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-15-P2b_5p
mirBase accessionMIMAT0006648
Sequence 
0- UAGCAGCACGUAAAUAUUGGCGU -23
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Proposed targets TargetScanVert: cfa-miR-16
miRDB: MIMAT0006648
Star sequence

Cfa-Mir-15-P2b_3p*
mirBase accessionNone
Sequence 
42- ACCAAUAUUAUUGUGCUGCUUUA -65
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