MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-130-P3b

Family name MIR-130 (all species)
Seed AGUGCAA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-454
Paralogues Cfa-Mir-130-P1c  Cfa-Mir-130-P2a  Cfa-Mir-130-P2b  Cfa-Mir-130-P4a 
Orthologues Bta-Mir-130-P3b  Cmi-Mir-130-P3b  Cpo-Mir-130-P3b  Dno-Mir-130-P3b  Dre-Mir-130-P3b1  Gmo-Mir-130-P3b1  Hsa-Mir-130-P3b  Lch-Mir-130-P3b  Mdo-Mir-130-P3b  Mml-Mir-130-P3b  Oan-Mir-130-P3b  Sha-Mir-130-P3b  Sto-Mir-130-P3b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)		 chr9: 33714194-33714258 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-130-P3b)		 Mir-130-P3b chr9: 33714194-33714258 [-] UCSC Ensembl
Mir-130-P2b chr9: 33724582-33724643 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUUUUCUGUUUAUGACCAGAUCCUAGAACCCUAUCGAUAUUGUCUCUGCUGUGUAAAUAGCUCUGAGUAGUGCAAUAUUGCUUAUAGGGUUUUGGUGUUUGGGAAGAACGAUGGGCAGGUUG
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Structure
        10          20        30           40        50        60 
AAAAUUUUCUGUUUAUGA--     UC            ---|        CU     GUGUAAA 
                    CCAGA  CUAGAACCCUAU   CGAUAUUGU  CUGCU       \
                    GGUUU  GGUUUUGGGAUA   GUUAUAACG  GAUGA       U
GUUGGACGGGUAGCAAGAAG     GU            UUC^        U-     GUCUCGA 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-130-P3b_5p*
mirBase accessionNone
Sequence 
0- ACCCUAUCGAUAUUGUCUCUGCU -23
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Mature sequence

Cfa-Mir-130-P3b_3p
mirBase accessionMIMAT0009927
Sequence 
40- UAGUGCAAUAUUGCUUAUAGGGUUU -65
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Proposed targets TargetScanVert: cfa-miR-454
miRDB: MIMAT0009927