MirGeneDB 2.1
MirGeneDB ID

Cel-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-252
Paralogues Cel-Mir-252-P1 
Orthologues Aae-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cgi-Mir-252-P2  Csc-Mir-252-P2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dma-Mir-252-P2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Hme-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Npo-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Sko-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Xbo-Mir-252-P2g  Xbo-Mir-252-P2h 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(ce11)		 chrII: 11446877-11446940 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUUACUAUUCCAGGGGUCUCUUUCAGUUAUAAGUAGUAGUGCCGCAGGUAACCGCCAGUCUAAAAGGCUUACCUACUGCCUUCUGCUUAAAAUUGAAAUAUUGAUGACCAUUGAUUGUUUAC
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Structure
        10        20          30        40        50        60  
AUCUUACUAUUCCAGGGGUCUC--|       A       U  U  CGC      CCGCCAGU 
                        UUUCAGUU UAAGUAG AG GC   AGGUAA        \
                        AAAGUUAA AUUCGUC UC CG   UCCAUU        C
CAUUUGUUAGUUACCAGUAGUUAU^       A       U  -  UCA      CGGAAAAU 
  120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Wt Da Ea Mi Yo Yo
Mature sequence

Cel-Mir-252-P2_5p
mirBase accessionMIMAT0000308
Sequence 
0- AUAAGUAGUAGUGCCGCAGGUAA -23
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Proposed targets microrna.org: MIMAT0000308
TargetScanWorm: cel-miR-252
Star sequence

Cel-Mir-252-P2_3p*
mirBase accessionMIMAT0020340
Sequence 
42- ACCUACUGCCUUCUGCUUAAAA -64
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