| MirGeneDB ID | Cbr-Mir-252-P2 |
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| Family name |
MIR-252 (all species) |
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| Seed |
UAAGUAG |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-252
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| Paralogues |
Cbr-Mir-252-P1
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| Orthologues |
Aae-Mir-252-P2
Bfl-Mir-252-P2
Bge-Mir-252-P2-v1
Bge-Mir-252-P2-v2
Bla-Mir-252-P2
Cel-Mir-252-P2
Cgi-Mir-252-P2
Csc-Mir-252-P2
Cte-Mir-252-P2
Dan-Mir-252-P2-v1
Dan-Mir-252-P2-v2
Dma-Mir-252-P2
Dme-Mir-252-P2-v1
Dme-Mir-252-P2-v2
Dmo-Mir-252-P2-v1
Dmo-Mir-252-P2-v2
Dpu-Mir-252-P2-v1
Dpu-Mir-252-P2-v2
Dsi-Mir-252-P2-v1
Dsi-Mir-252-P2-v2
Dya-Mir-252-P2-v1
Dya-Mir-252-P2-v2
Hme-Mir-252-P2
Isc-Mir-252-P2-v1
Isc-Mir-252-P2-v2
Lan-Mir-252-P2
Lgi-Mir-252-P2
Lpo-Mir-252-P2c
Lpo-Mir-252-P2d
Npo-Mir-252-P2
Pfl-Mir-252-P2
Pmi-Mir-252-P2
Sko-Mir-252-P2
Spu-Mir-252-P2
Tca-Mir-252-P2
Xbo-Mir-252-P2g
Xbo-Mir-252-P2h
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| Node of Origin (locus) |
Bilateria
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| Node of Origin (family) |
Bilateria
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Genome context
(CB4) |
II: 8309594-8309659 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCCUAUUCCAACCGAGGUCUCUCCCAGUUAUAAGUAGUAGUGCCGCAGGUAACCGCUUCCAGAAAAUUGGUUUACCUACUGCCUUCUGCUUAGAAUUGGGAUUUUGAUGACCGUCUAUAAUAAUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UUCCUAUUCCAACCGAGGUCUC--| A U U CGC CCGCUUCCA
UCCCAGUU UAAGUAG AG GC AGGUAA \
AGGGUUAA AUUCGUC UC CG UCCAUU G
AUAAUAAUAUCUGCCAGUAGUUUU^ G U - UCA UGGUUAAAA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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02 |
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06 |
07 |
08 |
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10 |
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13 |
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16 |
Cb |
Ea |
Ma |
Yo |
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| Mature sequence |
Cbr-Mir-252-P2_5p |
| mirBase accession | MIMAT0000507 |
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| Sequence |
0- AUAAGUAGUAGUGCCGCAGGUAA -23
Get sequence
|
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| Star sequence |
Cbr-Mir-252-P2_3p* |
| mirBase accession | None |
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| Sequence |
44- ACCUACUGCCUUCUGCUUAGAA -66
Get sequence
|
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