| MirGeneDB ID | Cbr-Mir-277-P6b |
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| Family name |
MIR-277 (all species) |
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| Seed |
AAAUGCA |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-232-2
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| Paralogues |
Cbr-Mir-277-P6a
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| Orthologues |
Aae-Mir-277
Bge-Mir-277
Bpl-Mir-277
Cel-Mir-277
Cgi-Mir-277
Dan-Mir-277
Dma-Mir-277
Dme-Mir-277
Dmo-Mir-277
Dpu-Mir-277
Dsi-Mir-277
Dya-Mir-277
Efe-Mir-277
Esc-Mir-277
Hme-Mir-277
Isc-Mir-277
Lgi-Mir-277
Npo-Mir-277
Obi-Mir-277
Ovu-Mir-277
Sme-Mir-277-P6b
Tca-Mir-277
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
Protostomia
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Genome context
(CB4) |
IV: 8370520-8370581 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGUAAGUUUCUCAAUUCAAGAUUUCGGAUCUCCGUAGUUUUGACCAUUUUAUCCAACCUAAUAAUGUGAUAAAUGCAUCUUAACUGCGGUGAUCUGGAUUUUGUGAACCGUUUUUUUUCACC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGUAAGUUUCUCAAUUCA--| U U UU CCAU CAACCU
AGA UUCGGAUC CCGUAGUU GA UUUAUC A
UUU AGGUCUAG GGCGUCAA CU AAAUAG A
CCACUUUUUUUUGCCAAGUG^ U U UU ACGU UGUAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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Cb |
Ea |
Ma |
Yo |
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| Star sequence |
Cbr-Mir-277-P6b_5p* |
| mirBase accession | None |
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| Sequence |
0- UCCGUAGUUUUGACCAUUUUAUC -23
Get sequence
|
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| Mature sequence |
Cbr-Mir-277-P6b_3p |
| mirBase accession | MIMAT0000497 |
|---|
| Sequence |
39- UAAAUGCAUCUUAACUGCGGUGA -62
Get sequence
|
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