MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-506-P6

Family name MIR-506 (all species)
Seed UCAUAGG
Species Cow (Bos taurus)
MiRBase ID
Paralogues Bta-Mir-506-P1  Bta-Mir-506-P2f  Bta-Mir-506-P2g  Bta-Mir-506-P2h  Bta-Mir-506-P3 
Orthologues Cpo-Mir-506-o6  Cpo-Mir-506-P6  Ete-Mir-506-P6e  Ete-Mir-506-P6f  Hsa-Mir-506-P6a1  Hsa-Mir-506-P6a2  Hsa-Mir-506-P6b  Hsa-Mir-506-P6c  Mml-Mir-506-P6a  Mml-Mir-506-P6b1  Mml-Mir-506-P6b2  Mml-Mir-506-P6c1  Mml-Mir-506-P6c2  Ocu-Mir-506-P6  Rno-Mir-506-P6 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037357.1: 29980078-29980135 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACACUAAGCCAUUCAGUGUACAGUGCCUUUCAUAGGAAGGUGUCAUUCAUGUGGUCUACAAUUUGAAUGCCACUUUUUUGUGAAGAGUAAUGUACAACAUGCAGGGCAUGGUGGUA
Get precursor sequence
Structure
        10          20        30        40        50        
CCACACUAAGCCAUUCAG--|     G   C               U      UGUGGU 
                    UGUACA UGC UUUCAUAGGAAGGUG CAUUCA      C
                    ACAUGU AUG GAAGUGUUUUUUCAC GUAAGU      U
AUGGUGGUACGGGACGUACA^     A   A               C      UUAACA 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-506-P6_5p
mirBase accessionNone
Sequence 
0- UUCAUAGGAAGGUGUCAUUCA -21
Get sequence
Star sequence

Bta-Mir-506-P6_3p*
mirBase accessionNone
Sequence 
37- AAUGCCACUUUUUUGUGAAGA -58
Get sequence