| MirGeneDB ID | Bta-Mir-504 |
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| Family name |
MIR-504 (all species) |
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| Seed |
GACCCUG |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-504
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| Paralogues |
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| Orthologues |
Cfa-Mir-504-v1
Cfa-Mir-504-v2
Cpo-Mir-504-v1
Cpo-Mir-504-v2
Dno-Mir-504-v1
Dno-Mir-504-v2
Ete-Mir-504-v1
Ete-Mir-504-v2
Hsa-Mir-504-v1
Hsa-Mir-504-v2
Mml-Mir-504-v1
Mml-Mir-504-v2
Mmu-Mir-504-v1
Mmu-Mir-504-v2
Ocu-Mir-504-v1
Ocu-Mir-504-v2
Rno-Mir-504-v1
Rno-Mir-504-v2
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 22089371-22089429 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAGUGGAACGUUGACGAGGCUGCUGUUGGGAGACCCUGGUCUGCACUCUGUCUGUAUGCUUACUGAAGGGAGCGCAGGGCAGGGUUUCCCAUACAGAGGGCACAGGCAACCACUGCAUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAGUGGAACGUUGACGAG G- - G A G-| UGUAU
GCU CUGU UGGGAGACCCUG UCUGC CUCU UC G
CGG GACA ACCCUUUGGGAC GGACG GAGG AG C
GUACGUCACCAACGGACA GA U G C GA^ UCAUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-504_5p |
| mirBase accession | MIMAT0009340 |
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| Sequence |
0- AGACCCUGGUCUGCACUCUGUCU -23
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-504
|
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| Star sequence |
Bta-Mir-504_3p* |
| mirBase accession | None |
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| Sequence |
36- AGGGAGCGCAGGGCAGGGUUUCC -59
Get sequence
|
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