MirGeneDB 2.1
MirGeneDB ID

Ete-Mir-504-v1

Family name MIR-504 (all species)
Seed GACCCUG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-504-v2 
Orthologues Bta-Mir-504  Cfa-Mir-504-v1  Cpo-Mir-504-v1  Dno-Mir-504-v1  Hsa-Mir-504-v1  Mml-Mir-504-v1  Mmu-Mir-504-v1  Ocu-Mir-504-v1  Rno-Mir-504-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980367: 6316013-6316071 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CAGUAAAAUGCUGACGCUGCUGCUGUUGGGAGACCCUGGUCUGCACUCUAUCUGUAUGCUUACUGAGGGGAGAGCAGAGCAGGGUUUCCCAUACAGAGGGCACAGGCUGCUGCCCUGUG
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Structure
        10        20          30        40        50         
CAGUAAAAUGCUGACGCU   G-    -            G     A    A-| UGUAU 
                  GCU  CUGU UGGGAGACCCUG UCUGC CUCU  UC     G
                  CGG  GACA ACCCUUUGGGAC AGACG GAGG  AG     C
GUGUCCCGUCGUCGGACA   GA    U            G     A    GG^ UCAUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Ete-Mir-504-v1_5p
mirBase accessionNone
Sequence 
0- AGACCCUGGUCUGCACUCUAUC -22
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Star sequence

Ete-Mir-504-v1_3p* (predicted)
mirBase accessionNone
Sequence 
37- GGGAGAGCAGAGCAGGGUUUCC -59
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