| MirGeneDB ID | Sto-Mir-24-P1 |
|---|
| Family name |
MIR-24 (all species) |
|---|
| Seed |
GGCUCAG |
|---|
| Species |
Cloudy Catshark (Scyliorhinus torazame) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Sto-Mir-24-P2
Sto-Mir-24-P3
Sto-Mir-24-P4
|
|---|
| Orthologues |
Dre-Mir-24-P1
Gmo-Mir-24-P1
Lch-Mir-24-P1
Loc-Mir-24-P1
Pma-Mir-24-o1
Tni-Mir-24-P1
|
|---|
| Node of Origin (locus) |
Gnathostomata
|
|---|
| Node of Origin (family) |
Vertebrata
|
|---|
Genome context
(GCA_003427355_STO_add) |
BFAA01002570.1: 216501-216561 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCUCUCAAGACAAGUUGGACUCUAUCUCCCGUGCCUACUGAGCUGAUUAGCAGUUGAUACCAGAAACACUGGCUCAGUUCAGCAGGAACAGGAGCUCAGUACCAUUUUCCACAGGGAACCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCUCUCAAGACAAGUUGG---| CUAU C G A UUAG UGAUAC
ACU CUCC GU CCU CUGAGCUGA CAGU \
UGA GAGG CA GGA GACUUGACU GUCA C
ACCAAGGGACACCUUUUACCA^ CUC- A A C CG-- CAAAGA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Sto-Mir-24-P1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GUGCCUACUGAGCUGAUUAGCAGU -24
Get sequence
|
|---|
| Mature sequence |
Sto-Mir-24-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UGGCUCAGUUCAGCAGGAACAG -61
Get sequence
|
|---|
