MirGeneDB 2.1
MirGeneDB ID

Sto-Mir-23-P4

Family name MIR-23 (all species)
Seed UCACAUU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-23-P1  Sto-Mir-23-P2  Sto-Mir-23-P3 
Orthologues Cmi-Mir-23-P4  Dre-Mir-23-P4a  Gmo-Mir-23-P4a  Lch-Mir-23-P4  Loc-Mir-23-P4  Mal-Mir-23-P4a  Tni-Mir-23-P4a  Xla-Mir-23-P4c  Xla-Mir-23-P4d  Xtr-Mir-23-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01000014.1: 1434855-1434919 [+]
Precursor
(pre-Mir +30nt flank)
CAGCCCACUCCUCUCUUGCUGUGACUGUAGGGGUUCCUGGCAUUGUGAUUUAAUGAUUAAAUAAAAGUGAAAAAUCACAUUGCCAGGGAUUACCACAGAGUCACAGGCACAGGCAGCUGCUCGCG
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Structure
        10         20          30         40        50        60 
CAGCCCACUCCUCUCUUG-       --|  A  -           U        AAUGAUUAA 
                   CUGUGAC  UGU GG GGUUCCUGGCA UGUGAUUU         A
                   GACACUG  ACA CC UUAGGGACCGU ACACUAAA         U
GCGCUCGUCGACGGACACG       AG^  -  A           U        AAGUGAAAA 
   120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Sto-Mir-23-P4_5p*
mirBase accessionNone
Sequence 
0- GGGUUCCUGGCAUUGUGAUUU -21
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Mature sequence

Sto-Mir-23-P4_3p
mirBase accessionNone
Sequence 
43- AUCACAUUGCCAGGGAUUACCA -65
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