| MirGeneDB ID | Sha-Mir-7373-o4 |
| Family name |
MIR-7373 (all species) |
| Seed |
AGCCCUU |
| Species |
Tasmanian devil (Sarcophilus harrisii) |
| MiRBase ID |
|
| Paralogues |
Sha-Mir-7373-o1
Sha-Mir-7373-o2
Sha-Mir-7373-o3
Sha-Mir-7373-o5
Sha-Mir-7373-o6
Sha-Mir-7373-o7
Sha-Mir-7373-o8a
Sha-Mir-7373-o8b
Sha-Mir-7373-o8c
Sha-Mir-7373-o8d1
Sha-Mir-7373-o8d2
Sha-Mir-7373-o8e
Sha-Mir-7373-o8f
Sha-Mir-7373-o8g
Sha-Mir-7373-o8h
Sha-Mir-7373-o8i
Sha-Mir-7373-o8j
Sha-Mir-7373-o9a
Sha-Mir-7373-o9b
Sha-Mir-7373-o9c
|
| Orthologues |
Mdo-Mir-7373-P4a
Mdo-Mir-7373-P4b
|
| Node of Origin (locus) |
S. harrisii
|
| Node of Origin (family) |
Marsupialia
|
Genome context (DEVIL_add) |
GL867601.1: 2081864-2081918 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGAAAGGAGGUCCCACUGAGGUAGAGGGGCAAGCCCUUACCAUUUGGUCUGAUAGAUGUCACUCAGAUCAAACAGAAGGGACUGCUUCUUCAUCUCAUAGCACAACACCCUUCAG
Get precursor sequence
|
| Structure | 10 20 30 40 50
GGAAAGGAGGUCCCACU--| AG AG ACCA UAGA
GAGGU AGGGGCA CCCUU UUUGGUCUGA U
CUCUA UCUUCGU GGGAA AAACUAGACU G
GACUUCCCACAACACGAUA^ CU CA GAC- CACU
110 100 90 80 70 60 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
| |
|
|
|
|
|
|
|
|
|
|
| Mature sequence |
Sha-Mir-7373-o4_5p |
| mirBase accession | None |
| Sequence |
0- AAGCCCUUACCAUUUGGUCUGA -22
Get sequence
|
| Star sequence |
Sha-Mir-7373-o4_3p* |
| mirBase accession | None |
| Sequence |
34- AGAUCAAACAGAAGGGACUGC -55
Get sequence
|