MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-152
Paralogues Rno-Mir-148-P1  Rno-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr10: 84719332-84719392 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAGGCUCGGCGCCGCUGUUCCCCGGGCCCAGGUUCUGUGAUACACUCCGACUCGGGCUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGCCCGGUAGGACUUUCUGCACCCAGCGGACU
Get precursor sequence
Structure
        10         20         30        40        50        60 
AGGAGGCUCGGCGCCGCU-    C-|                G  A    CC    CGGGCU 
                   GUUC  CCGGGCCCAGGUUCUGU AU CACU  GACU      \
                   CAGG  GGCCCGGGUUCAAGACA UA GUGA  CUGA      C
UCAGGCGACCCACGUCUUU    AU^                G  C    --    CGAGGU 
 .       110       100        90        80          70
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Star sequence

Rno-Mir-148-P3_5p*
mirBase accessionMIMAT0017134
Sequence 
0- CAGGUUCUGUGAUACACUCCGACU -24
Get sequence
Proposed targets TargetScanVert: rno-miR-152-5p
miRDB: MIMAT0017134
Mature sequence

Rno-Mir-148-P3_3p
mirBase accessionMIMAT0000854
Sequence 
39- UCAGUGCAUGACAGAACUUGGG -61
Get sequence
Proposed targets microrna.org: MIMAT0000854
TargetScanVert: rno-miR-152-3p
miRDB: MIMAT0000854