| MirGeneDB ID | Pfl-Mir-4818-P5 |
|---|
| Family name |
MIR-4818 (all species) |
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| Seed |
AUUGCAC |
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| Species |
Ptychodera (Ptychodera flava) |
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| MiRBase ID |
|
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| Paralogues |
Pfl-Mir-4818-P1
Pfl-Mir-4818-P2
Pfl-Mir-4818-P3
Pfl-Mir-4818-P4
Pfl-Mir-4818-P6
|
|---|
| Orthologues |
Sko-Mir-4818-P5
|
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| Node of Origin (locus) |
Enteropneusta
|
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| Node of Origin (family) |
Enteropneusta
|
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Genome context
(Pfl) |
LD345931.1: 60244-60301 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
GUCAUUGGCAACAAACUUGUGAAGAUAUAGCCUCAUUGCCGUGUGCAAUCAGUACAAAGUAAUUCUCAUUGCACACAGUAGUGGGGCUUUAUCUUACAAACUUUCCACAUACCAUGUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUCAUUGGCAACAAACU---| A U C C UACAA
UGUGA GAUA AGCCUCAUUGC GUGUGCAAU AG A
ACAUU CUAU UCGGGGUGAUG CACACGUUA UC G
AUGUACCAUACACCUUUCAA^ - U A C UUAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pfl-Mir-4818-P5_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CCUCAUUGCCGUGUGCAAUCAG -22
Get sequence
|
|---|
| Mature sequence |
Pfl-Mir-4818-P5_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CAUUGCACACAGUAGUGGGGCU -58
Get sequence
|
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