| MirGeneDB ID | Ovu-Novel-89 |
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| Family name |
OCT-NOVEL-89 (all species) |
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| Seed |
CCUGCGG |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-89
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01004709.1: 246024-246078 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GACGCUACUGAUGUUUUCAUGAAGCCCGUUUCCUGCGGCGUUUCUGACAGAAAAAAUAGUGUUUUUGCCGAUUGGCCGCAGAGGUAUGGUCUGCAUUGCAUAACCACAUUCAGAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GACGCUACUGAUGUUUUC- A C U -| GUU U A AAA
AUG AG CCGU UC CUGCGGC UC G CAGAAA U
UAC UC GGUA GG GACGCCG AG C GUUUUU A
AAGACUUACACCAAUACGU G U U A^ GUU - C GUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-89_5p |
| mirBase accession | None |
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| Sequence |
0- UCCUGCGGCGUUUCUGACAGAAA -23
Get sequence
|
|---|
| Star sequence |
Ovu-Novel-89_3p* |
| mirBase accession | None |
|---|
| Sequence |
33- UUUGCCGAUUGGCCGCAGAGGU -55
Get sequence
|
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