| MirGeneDB ID | Obi-Novel-89 |
|---|
| Family name |
OCT-NOVEL-89 (all species) |
|---|
| Seed |
CCUGCGG |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Ovu-Novel-89
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ417724: 424086-424140 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GACGCUACUGAUGUUUUCAUGAAGCCCGUUUCCUGCGGCGUUUCUGACAGAAAAAAUAGUGUUUUUGCCGAUUGGCCGCAGAGGUAUGGUCUGCAUUGCAUAACCACAUUCAGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GACGCUACUGAUGUUUUC- A C U -| GUU U A AAA
AUG AG CCGU UC CUGCGGC UC G CAGAAA U
UAC UC GGUA GG GACGCCG AG C GUUUUU A
AAGACUUACACCAAUACGU G U U A^ GUU - C GUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-89_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCCUGCGGCGUUUCUGACAGAAA -23
Get sequence
|
|---|
| Star sequence |
Obi-Novel-89_3p* |
| mirBase accession | None |
|---|
| Sequence |
33- UUUGCCGAUUGGCCGCAGAGGU -55
Get sequence
|
|---|
