| MirGeneDB ID | Ovu-Novel-79 |
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| Family name |
OCT-NOVEL-79 (all species) |
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| Seed |
GUGCCUC |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Novel-79
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| Node of Origin (locus) |
Octopus
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| Node of Origin (family) |
Octopus
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01046305.1: 333218-333278 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCCAUGCUUCUGCGGAGUCCGUACAUCUGCUGUGCCUCAUUGAUUUUCAUUGAGCAGAUUCUAGAAGGUUCGAUGAUCAGUGAGACAGAGGUGAAGUGCUGUGCCAGCGACAUGUGACACC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCCAUGCUUCUGCGGAGUCC--| A UG G C UUU AGAUU
GUAC UC CU UG CUCAUUGA UCAUUGAGC C
CGUG AG GA AC GAGUGACU AGUAGCUUG U
CCACAGUGUACAGCGACCGUGU^ A UG G A --- GAAGA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Mature sequence |
Ovu-Novel-79_5p |
| mirBase accession | None |
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| Sequence |
0- UGUGCCUCAUUGAUUUUCAUUGAGC -25
Get sequence
|
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| Co-mature sequence |
Ovu-Novel-79_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UCGAUGAUCAGUGAGACAGAGG -61
Get sequence
|
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