| MirGeneDB ID | Obi-Novel-79 |
|---|
| Family name |
OCT-NOVEL-79 (all species) |
|---|
| Seed |
CGAUGAU |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Novel-79
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ425531: 383563-383623 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCCAUGCUUCUGCGGAGUCCGUACAUCUGCUGUGCCUCAUUGAUUUUCAUUGAGCAGAUUCUAGAAGGUUCGAUGAUCAGUGAGACAGAGGUGAAGUGCUGUGCCAGCGACAUGUGACAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCCAUGCUUCUGCGGAGUCC--| A UG G C UUU AGAUU
GUAC UC CU UG CUCAUUGA UCAUUGAGC C
CGUG AG GA AC GAGUGACU AGUAGCUUG U
CUACAGUGUACAGCGACCGUGU^ A UG G A --- GAAGA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Obi-Novel-79_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGUGCCUCAUUGAUUUUCAUUGAGC -25
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-79_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UCGAUGAUCAGUGAGACAGAGG -61
Get sequence
|
|---|
