MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-28-P3

Family name MIR-28 (all species)
Seed AACUAGA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-708
Paralogues Ocu-Mir-28-P1  Ocu-Mir-28-P2 
Orthologues Bta-Mir-28-P3  Cfa-Mir-28-P3  Cpo-Mir-28-P3  Dno-Mir-28-P3  Ete-Mir-28-P3  Hsa-Mir-28-P3  Mml-Mir-28-P3  Mmu-Mir-28-P3  Rno-Mir-28-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chr1: 137399785-137399853 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGCCGUGUAUGAAAUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUGAAUGACGUGCACGCGAACACAACUAGACUGUGAGCUUCUAGAGGGCAGGGGCCUCACCCUAGUCAUCUCUCU
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Structure
        10          20        30        40        50        60    
ACUGCCGUGUAUGAAAU--|  AA        A           A     C  GGGGUGAAUGAC 
                   GGU  CUGCCCUC AGGAGCUUACA UCUAG UG            \
                   CCG  GACGGGAG UCUUCGAGUGU AGAUC AC            G
UCUCUCUACUGAUCCCACU^  GG        A           C     A  ACAAGCGCACGU 
       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-28-P3_5p*
mirBase accessionMIMAT0048561
Sequence 
0- AAGGAGCUUACAAUCUAGCUGGG -23
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Mature sequence

Ocu-Mir-28-P3_3p
mirBase accessionMIMAT0048562
Sequence 
46- CAACUAGACUGUGAGCUUCUAGA -69
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