| MirGeneDB ID | Ocu-Mir-1912 |
|---|
| Family name |
MIR-1912 (all species) |
|---|
| Seed |
ACCCAGA |
|---|
| Species |
Rabbit (Oryctolagus cuniculus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-1912
Cfa-Mir-1912
Cpo-Mir-1912
Ete-Mir-1912
Hsa-Mir-1912
Mml-Mir-1912
Mmu-Mir-1912
Rno-Mir-1912
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(oryCun2_add) |
chrX: 63087552-63087607 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAUCACAGCUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGGGCUGUGUAUAUUUUUUAUUCAAUACCCAGAGCAUGCAGUGUGAACAUAAUAGAGAUUAAAAGGCAGUCAGAAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUCACAGCUGGACUUGG--| GG GCU GG U AUUUU
CUCUA AUGU CAUUGCAUG CUG GUAU U
GAGAU UACA GUGACGUAC GAC CAUA U
AGAAGACUGACGGAAAAUUA^ AA AGU GA C ACUUA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Ocu-Mir-1912_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CUCAUUGCAUGGGCUGUGUAUA -22
Get sequence
|
|---|
| Mature sequence |
Ocu-Mir-1912_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
34- UACCCAGAGCAUGCAGUGUGAA -56
Get sequence
|
|---|
