| MirGeneDB ID | Cpo-Mir-1912 |
|---|
| Family name |
MIR-1912 (all species) |
|---|
| Seed |
ACCCAGA |
|---|
| Species |
Guinea pig (Cavia porcellus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-1912
Cfa-Mir-1912
Ete-Mir-1912
Hsa-Mir-1912
Mml-Mir-1912
Mmu-Mir-1912
Ocu-Mir-1912
Rno-Mir-1912
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(cavPor3) |
scaffold_46: 5271936-5271990 [-]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAUCACCUCUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGAACUGUGUAUAUUUUUAUUCGAUACCCAGAGCAUGCAGUGUGAACAUAAUAGAGAUGGAAAGACAGCCAGAAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUCACCUCUGGACUUGG--| GG GCU AA U AUUUU
CUCUA AUGU CAUUGCAUG CUG GUAU \
GAGAU UACA GUGACGUAC GAC CAUA U
GGAAGACCGACAGAAAGGUA^ AA AGU GA C GCUUA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Cpo-Mir-1912_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CUCAUUGCAUGAACUGUGUAUA -22
Get sequence
|
|---|
| Mature sequence |
Cpo-Mir-1912_3p |
| mirBase accession | None |
|---|
| Sequence |
33- UACCCAGAGCAUGCAGUGUGAA -55
Get sequence
|
|---|
