| MirGeneDB ID | Obi-Novel-69-P3 |
|---|
| Family name |
OCT-NOVEL-69 (all species) |
|---|
| Seed |
AAAUGCG |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
|---|
| Paralogues |
Obi-Novel-69-P1
Obi-Novel-69-P2
|
|---|
| Orthologues |
Ovu-Novel-69-P3
|
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| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ417213: 421458-421518 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAAAAAAUCAGAAAUAUUGCAAAUAAAGGAAGCAAUUCUUGGUGCAUUCUACAGUAAUUUUAUAACAUGUAAAUGCGCCAUGAUUUGCACUUCUUUGUUUGCUUCUUGCAUCAAAGACUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAAAAAAUCAGAAAUAUU- A-| U U C GUAAUU
GCAAAUAAAGGA GCAA UC UGGUGCAUU UACA U
CGUUUGUUUCUU CGUU AG ACCGCGUAA AUGU U
AGUCAGAAACUACGUUCUU CA^ U U - ACAAUA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-69-P3_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCAAUUCUUGGUGCAUUCUACA -23
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-69-P3_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAAAUGCGCCAUGAUUUGCACU -61
Get sequence
|
|---|
