| MirGeneDB ID | Obi-Novel-35-v1 |
|---|
| Family name |
COL-NOVEL-35 (all species) |
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| Seed |
CCGCGAU |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
Obi-Novel-35-v2
Obi-Novel-35-v3
|
|---|
| Orthologues |
Esc-Novel-35-v1
Ovu-Novel-35-v1
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ418194: 2425999-2426059 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUUCCUUUUUUAUUUAUCCAUUGCAGUUGUUAUACGAACAAGUGGCUGUCGGUUGAAUUUUACACACAUCCGCGAUCACUUGUUGUAUGAAGGCAAACGCGUGGAACUUUCGUCUGGCUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUUCCUUUUUUAUUUAUC U AG ---| G GC U U AAUUU
CA UGC UUGU UAUAC AACAAGUG UG CGG UG \
GU GCG AACG GUAUG UUGUUCAC GC GCC AC U
UUUCGGUCUGCUUUCAAG - CA GAA^ - UA - U ACACA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-35-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UAUACGAACAAGUGGCUGUCGGUUG -25
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-35-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UCCGCGAUCACUUGUUGUAUGAA -61
Get sequence
|
|---|
