| MirGeneDB ID | Obi-Novel-10 |
|---|
| Family name |
CEP-NOVEL-10 (all species) |
|---|
| Seed |
UGGCGGA |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-10
Npo-Novel-10
Ovu-Novel-10
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
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Genome context
(PRJNA270931_OBI) |
KQ428200: 264164-264224 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AUGCUGACCAACAACUAGCACUGCAAGAGUGGUGGGCAACAAUUCCACCAGGACUGUCCCACCGUCCUCCUGGCGGAUUUGAUGCCACGGCGAAUGCAGCUGCUCCGGGAAUUCACAGAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUGCUGACCAACAACUA- -| AGA G G A U A CUGUCC
GCA CUGCA GU GUGG CA CAA UCC CCAGGA C
CGU GACGU CG CACC GU GUU AGG GGUCCU A
GAAGACACUUAAGGGCCU C^ AAG G - A U C CCUGCC
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-10_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GGUGGGCAACAAUUCCACCAGGA -23
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-10_3p |
| mirBase accession | None |
|---|
| Sequence |
39- CUGGCGGAUUUGAUGCCACGGC -61
Get sequence
|
|---|
