| MirGeneDB ID | Esc-Novel-10 |
|---|
| Family name |
CEP-NOVEL-10 (all species) |
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| Seed |
UGGCGGA |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Npo-Novel-10
Obi-Novel-10
Ovu-Novel-10
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-10_pre_SRIE01013658.1:1033644-1033784: 41-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGGUGCCUAGCGACCAGCACUGCAGGGGUGGUGGGCAACAAUUCCACCAGGACUGUCCGUCCUUCAUCCUGGCGGAUUUGAUGCCACGGCAAAUGCAGGUGCUCCAGGAGCUGGAAAAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUGGUGCCUAGCGACCA- -| GGG G G A U A CUGUCC
GCA CUGCA GU GUGG CA CAA UCC CCAGGA G
CGU GACGU CG CACC GU GUU AGG GGUCCU U
GGAAAAGGUCGAGGACCU G^ AAA G - A U C ACUUCC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Esc-Novel-10_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGUGGGCAACAAUUCCACCAGGA -23
Get sequence
|
|---|
| Mature sequence |
Esc-Novel-10_3p |
| mirBase accession | None |
|---|
| Sequence |
39- CUGGCGGAUUUGAUGCCACGGC -61
Get sequence
|
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